Prediction of binding rate of drug to human plasma protein based on heuristic method and support vector machine

Hong Zong Si, Xiao Jun Yao, Huan Xiang Liu, Jie Wang, Jia Zhong Li, Zhi De Hu, Man Cang Liu

Research output: Contribution to journalArticlepeer-review

7 Citations (Scopus)

Abstract

The binding rate to human plasma protein for 70 diverse drugs was modeled using the descriptors calculated from the molecular structure along with a quantitative structure-activity relationship (QSAR) technique. The heuristic method (HM) and support vector machine (SVM) were utilized to construct the linear and nonlinear prediction models, leading to a good cross-validation correlation coefficient Rcv2 of 0.80 and 0.82, respectively. By comparison the stability with prediction ability of the models, it was found that support vector machine was a good method for predicting the binding rate of drug to human plasma protein.

Original languageEnglish
Pages (from-to)415-422
Number of pages8
JournalActa Chimica Sinica
Volume64
Issue number5
Publication statusPublished - 2006
Externally publishedYes

Keywords

  • Binding rate to human plasma protein
  • Heuristic method
  • Quantitative structure-activity relationship
  • Support vector machine

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