Unsupervised Cross-Modality Domain Adaptation for Vestibular Schwannoma Segmentation and Koos Grade Prediction Based on Semi-supervised Contrastive Learning

Luyi Han, Yunzhi Huang, Tao Tan, Ritse Mann

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Domain adaptation has been widely adopted to transfer styles across multi-vendors and multi-centers, as well as to complement the missing modalities. In this challenge, we proposed an unsupervised domain adaptation framework for cross-modality vestibular schwannoma (VS) and cochlea segmentation and Koos grade prediction. We learn the shared representation from both ceT1 and hrT2 images and recover another modality from the latent representation, and we also utilize proxy tasks of VS segmentation and brain parcellation to restrict the consistency of image structures in domain adaptation. After generating missing modalities, the nnU-Net model is utilized for VS and cochlea segmentation, while a semi-supervised contrastive learning pre-train approach is employed to improve the model performance for Koos grade prediction. On CrossMoDA validation phase Leaderboard, our method received rank 4 in task1 with a mean Dice score of 0.8394 and rank 2 in task2 with Macro-Average Mean Square Error of 0.3941. Our code is available at https://github.com/fiy2W/cmda2022.superpolymerization.

Original languageEnglish
Title of host publicationBrainlesion
Subtitle of host publicationGlioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 8th International Workshop, BrainLes 2022, Held in Conjunction with MICCAI 2022, Revised Selected Papers
EditorsSpyridon Bakas, Ujjwal Baid, Bhakti Baheti, Alessandro Crimi, Sylwia Malec, Monika Pytlarz, Maximilian Zenk, Reuben Dorent
PublisherSpringer Science and Business Media Deutschland GmbH
Pages49-58
Number of pages10
ISBN (Print)9783031441523
DOIs
Publication statusPublished - 2023
Event8th International MICCAI Brainlesion Workshop, BrainLes 2022 - Singapore, Singapore
Duration: 18 Sept 202218 Sept 2022

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume14092 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference8th International MICCAI Brainlesion Workshop, BrainLes 2022
Country/TerritorySingapore
CitySingapore
Period18/09/2218/09/22

Keywords

  • Domain Adaptation
  • Segmentation
  • Semi-supervised Contrastive Learning
  • Vestibular Schwannoma

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